LogoLogo
Continuum WebsiteContinuum ApplicationsContinuum KnowledgeAxolotl Platform
Continuum Knowledge
Continuum Knowledge
  • Continuum
  • Data
    • Datasets
      • Pre Training Data
      • Types of Fine Tuning
      • Self Instruct Paper
      • Self-Alignment with Instruction Backtranslation
      • Systematic Evaluation of Instruction-Tuned Large Language Models on Open Datasets
      • Instruction Tuning
      • Instruction Fine Tuning - Alpagasus
      • Less is More For Alignment
      • Enhanced Supervised Fine Tuning
      • Visualising Data using t-SNE
      • UMAP: Uniform Manifold Approximation and Projection for Dimension Reduction
      • Training and Evaluation Datasets
      • What is perplexity?
  • MODELS
    • Foundation Models
      • The leaderboard
      • Foundation Models
      • LLama 2 - Analysis
      • Analysis of Llama 3
      • Llama 3.1 series
      • Google Gemini 1.5
      • Platypus: Quick, Cheap, and Powerful Refinement of LLMs
      • Mixtral of Experts
      • Mixture-of-Agents (MoA)
      • Phi 1.5
        • Refining the Art of AI Training: A Deep Dive into Phi 1.5's Innovative Approach
      • Phi 2.0
      • Phi-3 Technical Report
  • Training
    • The Fine Tuning Process
      • Why fine tune?
        • Does Fine-Tuning LLMs on New Knowledge Encourage Hallucinations?
        • Explanations in Fine Tuning
      • Tokenization
        • Tokenization Is More Than Compression
        • Tokenization - SentencePiece
        • Tokenization explore
        • Tokenizer Choice For LLM Training: Negligible or Crucial?
        • Getting the most out of your tokenizer for pre-training and domain adaptation
        • TokenMonster
      • Parameter Efficient Fine Tuning
        • P-Tuning
          • The Power of Scale for Parameter-Efficient Prompt Tuning
        • Prefix-Tuning: Optimizing Continuous Prompts for Generation
        • Harnessing the Power of PEFT: A Smarter Approach to Fine-tuning Pre-trained Models
        • What is Low-Rank Adaptation (LoRA) - explained by the inventor
        • Low Rank Adaptation (Lora)
        • Practical Tips for Fine-tuning LMs Using LoRA (Low-Rank Adaptation)
        • QLORA: Efficient Finetuning of Quantized LLMs
        • Bits and Bytes
        • The Magic behind Qlora
        • Practical Guide to LoRA: Tips and Tricks for Effective Model Adaptation
        • The quantization constant
        • QLORA: Efficient Finetuning of Quantized Language Models
        • QLORA and Fine-Tuning of Quantized Language Models (LMs)
        • ReLoRA: High-Rank Training Through Low-Rank Updates
        • SLoRA: Federated Parameter Efficient Fine-Tuning of Language Models
        • GaLora: Memory-Efficient LLM Training by Gradient Low-Rank Projection
      • Hyperparameters
        • Batch Size
        • Padding Tokens
        • Mixed precision training
        • FP8 Formats for Deep Learning
        • Floating Point Numbers
        • Batch Size and Model loss
        • Batch Normalisation
        • Rethinking Learning Rate Tuning in the Era of Language Models
        • Sample Packing
        • Gradient accumulation
        • A process for choosing the learning rate
        • Learning Rate Scheduler
        • Checkpoints
        • A Survey on Efficient Training of Transformers
        • Sequence Length Warmup
        • Understanding Training vs. Evaluation Data Splits
        • Cross-entropy loss
        • Weight Decay
        • Optimiser
        • Caching
      • Training Processes
        • Extending the context window
        • PyTorch Fully Sharded Data Parallel (FSDP)
        • Train Short, Test Long: Attention with Linear Biases Enables Input Length Extrapolation
        • YaRN: Efficient Context Window Extension of Large Language Models
        • Sliding Window Attention
        • LongRoPE
        • Reinforcement Learning
        • An introduction to reinforcement learning
        • Reinforcement Learning from Human Feedback (RLHF)
        • Direct Preference Optimization: Your Language Model is Secretly a Reward Model
  • INFERENCE
    • Why is inference important?
      • Grouped Query Attention
      • Key Value Cache
      • Flash Attention
      • Flash Attention 2
      • StreamingLLM
      • Paged Attention and vLLM
      • TensorRT-LLM
      • Torchscript
      • NVIDIA L40S GPU
      • Triton Inference Server - Introduction
      • Triton Inference Server
      • FiDO: Fusion-in-Decoder optimised for stronger performance and faster inference
      • Is PUE a useful measure of data centre performance?
      • SLORA
  • KNOWLEDGE
    • Vector Databases
      • A Comprehensive Survey on Vector Databases
      • Vector database management systems: Fundamental concepts, use-cases, and current challenges
      • Using the Output Embedding to Improve Language Models
      • Decoding Sentence-BERT
      • ColBERT: Efficient and Effective Passage Search via Contextualized Late Interaction over BERT
      • SimCSE: Simple Contrastive Learning of Sentence Embeddings
      • Questions Are All You Need to Train a Dense Passage Retriever
      • Improving Text Embeddings with Large Language Models
      • Massive Text Embedding Benchmark
      • RocketQAv2: A Joint Training Method for Dense Passage Retrieval and Passage Re-ranking
      • LLM2Vec: Large Language Models Are Secretly Powerful Text Encoders
      • Embedding and Fine-Tuning in Neural Language Models
      • Embedding Model Construction
      • Demystifying Embedding Spaces using Large Language Models
      • Fine-Tuning Llama for Multi-Stage Text Retrieval
      • Large Language Model Based Text Augmentation Enhanced Personality Detection Model
      • One Embedder, Any Task: Instruction-Finetuned Text Embeddings
      • Vector Databases are not the only solution
      • Knowledge Graphs
        • Harnessing Knowledge Graphs to Elevate AI: A Technical Exploration
        • Unifying Large Language Models and Knowledge Graphs: A Roadmap
      • Approximate Nearest Neighbor (ANN)
      • High Dimensional Data
      • Principal Component Analysis (PCA)
      • Vector Similarity Search - HNSW
      • FAISS (Facebook AI Similarity Search)
      • Unsupervised Dense Retrievers
    • Retrieval Augmented Generation
      • Retrieval-Augmented Generation for Large Language Models: A Survey
      • Fine-Tuning or Retrieval?
      • Revolutionising Information Retrieval: The Power of RAG in Language Models
      • A Survey on Retrieval-Augmented Text Generation
      • REALM: Retrieval-Augmented Language Model Pre-Training
      • Retrieve Anything To Augment Large Language Models
      • Generate Rather Than Retrieve: Large Language Models Are Strong Context Generators
      • Active Retrieval Augmented Generation
      • DSPy: LM Assertions: Enhancing Language Model Pipelines with Computational Constraints
      • DSPy: Compiling Declarative Language Model Calls
      • DSPy: In-Context Learning for Extreme Multi-Label Classification
      • Optimizing Instructions and Demonstrations for Multi-Stage Language Model Programs
      • HYDE: Revolutionising Search with Hypothetical Document Embeddings
      • Enhancing Recommender Systems with Large Language Model Reasoning Graphs
      • Retrieval Augmented Generation (RAG) versus fine tuning
      • RAFT: Adapting Language Model to Domain Specific RAG
      • Summarisation Methods and RAG
      • Lessons Learned on LLM RAG Solutions
      • Stanford: Retrieval Augmented Language Models
      • Overview of RAG Approaches with Vector Databases
      • Mastering Chunking in Retrieval-Augmented Generation (RAG) Systems
    • Semantic Routing
    • Resource Description Framework (RDF)
  • AGENTS
    • What is agency?
      • Rephrase and Respond: Let Large Language Models Ask Better Questions for Themselves
      • Types of Agents
      • The risk of AI agency
      • Understanding Personality in Large Language Models: A New Frontier in AI Psychology
      • AI Agents - Reasoning, Planning, and Tool Calling
      • Personality and Brand
      • Agent Interaction via APIs
      • Bridging Minds and Machines: The Legacy of Newell, Shaw, and Simon
      • A Survey on Language Model based Autonomous Agents
      • Large Language Models as Agents
      • AI Reasoning: A Deep Dive into Chain-of-Thought Prompting
      • Enhancing AI Reasoning with Self-Taught Reasoner (STaR)
      • Exploring the Frontier of AI: The "Tree of Thoughts" Framework
      • Toolformer: Revolutionising Language Models with API Integration - An Analysis
      • TaskMatrix.AI: Bridging Foundational AI Models with Specialised Systems for Enhanced Task Completion
      • Unleashing the Power of LLMs in API Integration: The Rise of Gorilla
      • Andrew Ng's presentation on AI agents
      • Making AI accessible with Andrej Karpathy and Stephanie Zhan
  • Regulation and Ethics
    • Regulation and Ethics
      • Privacy
      • Detecting AI Generated content
      • Navigating the IP Maze in AI: The Convergence of Blockchain, Web 3.0, and LLMs
      • Adverse Reactions to generative AI
      • Navigating the Ethical Minefield: The Challenge of Security in Large Language Models
      • Navigating the Uncharted Waters: The Risks of Autonomous AI in Military Decision-Making
  • DISRUPTION
    • Data Architecture
      • What is a data pipeline?
      • What is Reverse ETL?
      • Unstructured Data and Generatve AI
      • Resource Description Framework (RDF)
      • Integrating generative AI with the Semantic Web
    • Search
      • BM25 - Search Engine Ranking Function
      • BERT as a reranking engine
      • BERT and Google
      • Generative Engine Optimisation (GEO)
      • Billion-scale similarity search with GPUs
      • FOLLOWIR: Evaluating and Teaching Information Retrieval Models to Follow Instructions
      • Neural Collaborative Filtering
      • Federated Neural Collaborative Filtering
      • Latent Space versus Embedding Space
      • Improving Text Embeddings with Large Language Models
    • Recommendation Engines
      • On Interpretation and Measurement of Soft Attributes for Recommendation
      • A Survey on Large Language Models for Recommendation
      • Model driven recommendation systems
      • Recommender AI Agent: Integrating Large Language Models for Interactive Recommendations
      • Foundation Models for Recommender Systems
      • Exploring the Impact of Large Language Models on Recommender Systems: An Extensive Review
      • AI driven recommendations - harming autonomy?
    • Logging
      • A Taxonomy of Anomalies in Log Data
      • Deeplog
      • LogBERT: Log Anomaly Detection via BERT
      • Experience Report: Deep Learning-based System Log Analysis for Anomaly Detection
      • Log-based Anomaly Detection with Deep Learning: How Far Are We?
      • Deep Learning for Anomaly Detection in Log Data: A Survey
      • LogGPT
      • Adaptive Semantic Gate Networks (ASGNet) for log-based anomaly diagnosis
  • Infrastructure
    • The modern data centre
      • Enhancing Data Centre Efficiency: Strategies to Improve PUE
      • TCO of NVIDIA GPUs and falling barriers to entry
      • Maximising GPU Utilisation with Kubernetes and NVIDIA GPU Operator
      • Data Centres
      • Liquid Cooling
    • Servers and Chips
      • The NVIDIA H100 GPU
      • NVIDIA H100 NVL
      • Lambda Hyperplane 8-H100
      • NVIDIA DGX Servers
      • NVIDIA DGX-2
      • NVIDIA DGX H-100 System
      • NVLink Switch
      • Tensor Cores
      • NVIDIA Grace Hopper Superchip
      • NVIDIA Grace CPU Superchip
      • NVIDIA GB200 NVL72
      • Hopper versus Blackwell
      • HGX: High-Performance GPU Platforms
      • ARM Chips
      • ARM versus x86
      • RISC versus CISC
      • Introduction to RISC-V
    • Networking and Connectivity
      • Infiniband versus Ethernet
      • NVIDIA Quantum InfiniBand
      • PCIe (Peripheral Component Interconnect Express)
      • NVIDIA ConnectX InfiniBand adapters
      • NVMe (Non-Volatile Memory Express)
      • NVMe over Fabrics (NVMe-oF)
      • NVIDIA Spectrum-X
      • NVIDIA GPUDirect
      • Evaluating Modern GPU Interconnect
      • Scalable Hierarchical Aggregation and Reduction Protocol (SHARP)
      • Next-generation networking in AI environments
      • NVIDIA Collective Communications Library (NCCL)
    • Data and Memory
      • NVIDIA BlueField Data Processing Units (DPUs)
      • Remote Direct Memory Access (RDMA)
      • High Bandwidth Memory (HBM3)
      • Flash Memory
      • Model Requirements
      • Calculating GPU memory for serving LLMs
      • Transformer training costs
      • GPU Performance Optimisation
    • Libraries and Complements
      • NVIDIA Base Command
      • NVIDIA AI Enterprise
      • CUDA - NVIDIA GTC 2024 presentation
      • RAPIDs
      • RAFT
    • Vast Data Platform
      • Vast Datastore
      • Vast Database
      • Vast Data Engine
      • DASE (Disaggregated and Shared Everything)
      • Dremio and VAST Data
    • Storage
      • WEKA: A High-Performance Storage Solution for AI Workloads
      • Introduction to NVIDIA GPUDirect Storage (GDS)
        • GDS cuFile API
      • NVIDIA Magnum IO GPUDirect Storage (GDS)
      • Vectors in Memory
Powered by GitBook
LogoLogo

Continuum - Accelerated Artificial Intelligence

  • Continuum Website
  • Axolotl Platform

Copyright Continuum Labs - 2023

On this page

Was this helpful?

  1. Infrastructure
  2. Storage

NVIDIA Magnum IO GPUDirect Storage (GDS)

NVIDIA Magnum IO GPUDirect Storage (GDS)

NVIDIA Magnum IO GPUDirect Storage (GDS) is a technology designed to accelerate data transfers between GPU memory and remote or local storage by avoiding CPU bottlenecks.

Here are the key technical details:

Data Path

  • GDS creates a direct data path between local NVMe or remote storage and GPU memory.

  • This is enabled via a engine near the network adapter or storage that transfers data into or out of GPU memory, bypassing the bounce buffer in the CPU.

  • Traditional reads and writes to GPU memory use POSIX APIs to read/write data from system memory as an intermediate , which can cause IO bottlenecks.

POSIX APIs

The POSIX APIs (Portable Operating System Interface) are a family of standards specified by the IEEE for maintaining compatibility between operating systems.

POSIX defines the application programming interface (API), along with command line shells and utility interfaces, for software compatibility with variants of Unix and other operating systems.

Traditional Reads and Writes Using POSIX APIs

In the context of GPU computing, POSIX APIs are used to handle file I/O operations, such as reading from and writing to files. These APIs manage the movement of data between the storage (like a disk) and the application through the system's memory.

Here’s how it typically works:

  1. Reading Data:

    • Data Transfer: Data is first read from the storage into the system memory using POSIX read calls like read().

    • Intermediate Buffering: The data resides temporarily in what is often referred to as a "bounce buffer" in the system RAM.

    • Transfer to GPU Memory: From there, another operation is needed to transfer the data to the GPU memory for processing, typically managed through the GPU’s DMA (Direct Memory Access) capabilities or with additional API calls.

  2. Writing Data:

    • Data Collection: Data generated or processed by the GPU that needs to be saved is first transferred back to the system memory.

    • Intermediate Buffering: It is stored temporarily in the system RAM.

    • Writing Out: Finally, POSIX write calls like write() are used to move the data from the system RAM to the permanent storage.

Issues with POSIX APIs in GPU Computing

While POSIX APIs are widely supported and used for handling file operations, they pose several challenges and inefficiencies when used in GPU computing environments, particularly for high-performance computing (HPC), artificial intelligence (AI), and machine learning (ML) workloads:

  • Double Data Movement: Data must move from storage to system memory and then to GPU memory, which adds overhead and latency.

  • CPU Bottlenecks: The CPU must manage both reads and writes, which not only consumes CPU cycles that could otherwise be used for computation but also limits the speed at which data can be moved into and out of GPU memory.

  • Increased Latency and Reduced Throughput: The additional steps required for data to travel through system memory introduce delays and reduce the overall throughput of data processing applications, especially those requiring rapid access to large volumes of data.

Alternatives to Improve Efficiency

To mitigate these issues and enhance performance, technologies like NVIDIA’s GPUDirect Storage (GDS) are used. GDS allows data to bypass the CPU and system memory entirely, providing a direct data path from storage to GPU memory:

  • Direct Memory Access (DMA): GDS leverages DMA to move data directly between GPU memory and storage, reducing latency, and freeing up CPU resources for other tasks.

  • Eliminating Bounce Buffers: By removing the need for intermediate bounce buffers in system memory, GDS reduces the complexity of data handling and improves data transfer rates.

This approach significantly accelerates applications by minimizing data movement and reducing the load on the CPU, which is crucial for performance-critical applications such as deep learning inference and large-scale simulations.

Components and Integration

  • GDS is exposed within CUDA via the cuFile API.

  • The cuFile API is integrated into the CUDA Toolkit (version 11.4 and later) or delivered via a separate package containing a user-level library (libcufile) and kernel module (nvidia-fs).

  • The user-level library is integrated into the CUDA Toolkit runtime, and the kernel module is installed with the NVIDIA driver.

  • NVIDIA Mellanox OFED (MLNX_OFED) is required and must be installed prior to GDS installation.

Supported Technologies

  • GDS supports RDMA over InfiniBand and Ethernet RoCE.

  • It supports distributed file systems such as NFS, DDN EXAScaler, WekaIO, and IBM Spectrum Scale.

  • GDS supports storage protocols via NVMe and NVMe-oF.

  • It provides a compatibility mode for non-GDS ready platforms.

  • GDS is enabled on NVIDIA DGX Base OS and supports Ubuntu and RHEL operating systems.

Integration with Libraries, APIs, and Frameworks

  • GDS can be used with multiple libraries, APIs, and frameworks, including DALI (Data Loading Library), RAPIDS cuDF, PyTorch, and MXNet.

Performance Benefits

  • Higher Bandwidth: GDS achieves up to 2X more bandwidth available to the GPU compared to a standard CPU-to-CPU path.

  • Lower Latency: By avoiding extra copies in the host system memory and providing dynamic routing, GDS optimises path, buffers, and mechanisms, resulting in lower latency.

  • Reduced CPU Utilisation: The use of DMA engines near storage is less invasive to CPU load and doesn't interfere with GPU load. At larger data sizes, the ratio of bandwidth to fractional CPU utilisation is much higher with GDS.

Benchmarking Results

  • GDSIO Benchmark: Up to 1.5X improvement in bandwidth available to the GPU and up to 2.8X improvement in CPU utilization compared to traditional data paths via the CPU bounce buffer.

  • DeepCAM Benchmark: When optimised with GDS and NVIDIA DALI, DeepCAM (a deep learning model for climate simulations) can achieve up to a 6.6X speedup compared to out-of-the-box NumPy.

In summary, NVIDIA Magnum IO GPUDirect Storage is a technology that enables direct data transfer between GPU memory and storage, bypassing the CPU.

This results in higher bandwidth, lower latency, and reduced CPU utilisation, leading to improved performance for GPU-accelerated workflows in HPC, AI, and data analytics.

PreviousGDS cuFile APINextVectors in Memory

Last updated 10 months ago

Was this helpful?

Page cover image